PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07994
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 82aa    MW: 9175.48 Da    PI: 7.4178
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07994genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.5e-094479135
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgR 35
                     r+ W + Ed +l+++v+ +G+  W++Ia++++ kg+
         OIT07994 44 RDHWRPAEDAKLKELVAIYGPQKWNLIAEKLNvKGK 79
                     678****************************98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MSIDLNASCF NEEKPITMHS STIFNSSNIG KEITESGQSK LCARDHWRPA EDAKLKELVA  60
IYGPQKWNLI AEKLNVKGKV VD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.14e-15MYB family protein