PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08032
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 224aa    MW: 25267.3 Da    PI: 6.9343
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08032genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-3053111259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YY+C+s+ gC++kk+vers++d ++++itY+++Hnh+
  OIT08032  53 SDCWSWRKYGQKPIKGSPYPRGYYKCSSSkGCSAKKQVERSSTDSSLFIITYTSTHNHP 111
               699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGKSRPSKSD SKTSRLLEQQ LVATKKRKVA QKVVITVQME ANDIKQKNEG APSDCWSWRK  60
YGQKPIKGSP YPRGYYKCSS SKGCSAKKQV ERSSTDSSLF IITYTSTHNH PGPNFPNKDS  120
PLNPVTQDSS MTLQQPITDR HVSLEVNDSI SLVQQEENQF THKFLGTISY DDFLPLSYPQ  180
LMNFPKSELS EENDFYDELG ELQLPPSFTS FAGIFEETIL VDPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-23WRKY family protein