PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08118
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 253aa    MW: 28544.6 Da    PI: 7.2492
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08118genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-1877125355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  OIT08118  77 YRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFSTAEEAARAYDKEARKIRG 125
               9*******.**********954...3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MCGGAILADL IPRRDRRPSS TDLWPNSADF WPSSSFTKPI NSRVSTQNVT STPKRAQPSK  60
GNEQIQNIKK RQRKNLYRGI RQRPWGKWAA EIRDPRKGIR VWLGTFSTAE EAARAYDKEA  120
RKIRGKKAKA NFPNEDDNYS TAYECYDTSY NHESNNSNGS FYSLENQNAE PVMEYPLAYK  180
NSSGSVYNGS EEQKAENEVE KLTEELMAYE SLMKFYEIPY VDGQSMAATV NPAAEAAVGG  240
GSMDLWSFDD VSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.14e-46ERF family protein