PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08221
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 125aa    MW: 14440.2 Da    PI: 9.0992
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08221genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82e-1671122256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
               +y+GVr+++ +g+++AeIrdp     r  +r +l ++  +e+Aa a+++ + kl+g+
  OIT08221  71 RYRGVRRRP-WGKFAAEIRDPI----RkgARLWLRTYEMPEDAALAYDRSAYKLRGA 122
               7********.**********72....235**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MQPGISSEIF DLSNIICYDS MEHDFSENSS FSEIFSEISN QKGDTTPTSL QTCNNLGSKE  60
RGVHAPTNWR RYRGVRRRPW GKFAAEIRDP IRKGARLWLR TYEMPEDAAL AYDRSAYKLR  120
GARPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-20ERF family protein