PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08626
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 115aa    MW: 13106.6 Da    PI: 6.2558
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08626genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB127.84e-402881197
     NF-YB 11 anvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
               nv+rimk++lP  aki+k+aket+qec+sefisfvt+easdk ++e+r+t ng+d++wal++lGf +yve +  yl k re+e++k
  OIT08626  2 HNVGRIMKQILPPTAKICKEAKETIQECASEFISFVTGEASDKRHKENRRTFNGHDICWALSSLGFGNYVEVMLRYLYKLREFERQK 88
              69**********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
VHNVGRIMKQ ILPPTAKICK EAKETIQECA SEFISFVTGE ASDKRHKENR RTFNGHDICW  60
ALSSLGFGNY VEVMLRYLYK LREFERQKAN QTKGSNDEAT DEAASESENQ ECTTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.17e-41NF-YB family protein