PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08631
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 161aa    MW: 18269.8 Da    PI: 9.8898
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08631genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.1e-2078128155
       AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++ykGVr++k +g+WvAe+rd      k+ r++lg+f taeeAa a+++a  +++g
  OIT08631  78 KKYKGVRQRK-WGKWVAEVRDtR----KKNRIWLGTFNTAEEAALAYDKAVIEMRG 128
               59*******9.*******99933....359***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MASKEEHQEN EAMEKPSKNA GESSAILAPL VRMHDSPNDK EEKAEGEKSE RHEKAIIIEN  60
EKTDARKCEK KLLQGNAKKY KGVRQRKWGK WVAEVRDTRK KNRIWLGTFN TAEEAALAYD  120
KAVIEMRGVD AVTNILKPPP REPPPKEINF INPPPSSSTR V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-26ERF family protein