PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT18669
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 224aa    MW: 24004.8 Da    PI: 10.7057
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT18669genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-192776255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr ++ +gr++AeIrdp   g+++r++lg+f+ta eAaka++ a++ l+g
  OIT18669 27 HYRGVRKRP-WGRYAAEIRDP---GQKTRVWLGTFDTAVEAAKAYDTAARLLRG 76
              6********.**********8...557***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAENGHLAGT VAVPTANGGG VRSDEVHYRG VRKRPWGRYA AEIRDPGQKT RVWLGTFDTA  60
VEAAKAYDTA ARLLRGRRAI TNFSLTTEDS LMNTRDFMAK LSTRNHVNIN TNNHGPIQNS  120
DTGSSSGGGG AVRIPLPNQN PQSRHFPVTG CSAPLQLARD RYYVEALTRA GVLINRDPSS  180
QKKTIDFIGG GVNGGSGRGV QSEPPTTSTR PLNLELTLAP PGNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-33ERF family protein