PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT18804

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

CPP

Protein Properties

Length: 159aa MW: 17591.3 Da PI: 8.0573

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT18804	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	53.6	4.5e-17	13	52	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e OIT18804 13 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 52 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MQEEAGDGLV LPKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN FEGSQERQAL 60 FHGDHANNMA YLQQAANAAI TGAIGSSGYG SPPVNKKRKA QELFFGSMIK DPVHRLGQLQ 120 QVNITVVQFN LTCFSIVHVI FIVWHGICSD NNIVELKVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	2e-59	CPP family protein

Link Out ? help Back to Top
Ensembl	OIT18804