PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT18940
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 110aa    MW: 12785.9 Da    PI: 8.4406
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT18940genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.99.9e-151896590
              -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3  5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               +p+ + k++ l +pk+ +   g+ ++ s++ +l+  +g++W v+l  + +++r  l +GWk+Fv +n+Lk g +++F+l++ +++
  OIT18940 18 KVPKPYIKRDFLFIPKSIC---GYLPPISVKTMLRY-NGKEWAVTL--TSGGRR-RLVNGWKQFVVDNNLKKGNVLLFELVEATSE 96
              46788999999********...66677887777665.9********..444444.5889********************9987443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MDANEWIEEE LYPWFWMKVP KPYIKRDFLF IPKSICGYLP PISVKTMLRY NGKEWAVTLT  60
SGGRRRLVNG WKQFVVDNNL KKGNVLLFEL VEATSEAVIF SVEELGLTNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-07B3 family protein