PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT18959

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 370aa MW: 41599.4 Da PI: 4.3737

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT18959	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	44.1	6.6e-14	7	109	32	128
NAM 32 evikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrap..kge.ktdWvmhe 125 + i+ d+y +Pwd+ +++ ++++++ yfF+k ++++a g+r +r + g Wk k+k+v++ +++l+g kk++ + +++++ +g + W m+e OIT18959 7 DNIRVEDLYGNkKPWDIFeNNFLGDDTKVnYFFTKLKRTKAGGSRFSRgLIGGGCWKGLDKHKSVFK-GSKLIGFKKSFRYLEKEKSvdQGIkNIVWNMKE 106 4577778885439**6455555555545**************999***********9.9*********65443114432678*** PP NAM 126 yrl 128 y+l OIT18959 107 YSL 109 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
CKSFSCDNIR VEDLYGNKKP WDIFENNFLG DDTKVNYFFT KLKRTKAGGS RFSRGLIGGG 60 CWKGLDKHKS VFKGSKLIGF KKSFRYLEKE KSVDQGIKNI VWNMKEYSLN DNILKVLRQR 120 NILQNEDYVL CCIKGKIVHA NDHMEIADSG NNVVVVMNTM LSATQEHDDV TSSSEDQGTG 180 VHDLCPSNQF SSSEHNNAFD QLQLVDVQAQ NFEEMGPSLQ QDHSNIECDD RATVPSTLTE 240 IMNNIDHVDM KVYEHLGSLL AEKSNTAEPQ LPICIDEQNI MCQMAQGSST TMVNEENIDA 300 GFVSDQWSKE QVHNIEERAP ITFTDMLTSS DYYAEPSLVI SSDECFTMEE LLGSDDDDVI 360 AADLDCMGTQ

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

CKSFSCDNIR VEDLYGNKKP WDIFENNFLG DDTKVNYFFT KLKRTKAGGS RFSRGLIGGG  60
CWKGLDKHKS VFKGSKLIGF KKSFRYLEKE KSVDQGIKNI VWNMKEYSLN DNILKVLRQR  120
NILQNEDYVL CCIKGKIVHA NDHMEIADSG NNVVVVMNTM LSATQEHDDV TSSSEDQGTG  180
VHDLCPSNQF SSSEHNNAFD QLQLVDVQAQ NFEEMGPSLQ QDHSNIECDD RATVPSTLTE  240
IMNNIDHVDM KVYEHLGSLL AEKSNTAEPQ LPICIDEQNI MCQMAQGSST TMVNEENIDA  300
GFVSDQWSKE QVHNIEERAP ITFTDMLTSS DYYAEPSLVI SSDECFTMEE LLGSDDDDVI  360
AADLDCMGTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	3e-11	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT18959