PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT18971
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 96aa    MW: 11662.3 Da    PI: 5.9732
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT18971genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.41.6e-104761190
              HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               +++ + +pk f e+  +    s    + + +g+ W +++  + +++r ++++GWk Fv  n++k g  + F+l++ +ef
  OIT18971  4 ITQDYMHIPKYFYEHLPE----SHSTAVLHYDGEPWFMEI--NMGKRR-WFKDGWKYFVMNNNIKRGWLINFELVEITEF 76
              567889*******55542....234677788*********..777666.79**********************9865665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
DSYITQDYMH IPKYFYEHLP ESHSTAVLHY DGEPWFMEIN MGKRRWFKDG WKYFVMNNNI  60
KRGWLINFEL VEITEFCVIF QLHVTGRGTL QDPVEI