PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19183
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 239aa    MW: 27098.4 Da    PI: 8.2861
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19183genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19111161255
       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+ +a+ kl+g
  OIT19183 111 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAIEAAKAYYRAAFKLRG 161
               8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MASPQENCTT FDMIMEYYCS ETSTLYSQSS SSSEPSLNYA NTAQSSSSFF DNSETELDCF  60
EFETKPPACI SSNYPKQTNF KERRPSLNIA IPVKQRAVVQ KVELVPSEKK HYRGVRQRPW  120
GKFAAEIRDP NRKGTRVWLG TFDTAIEAAK AYYRAAFKLR GSKAIVNFPL EVANFKQLVI  180
NNEIQPLVNS SRKRVRGTDN EEQLVINKEM KIEEERVPTA ADPLTPTSWS AIWDSGDAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.16e-45ERF family protein