PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19271
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 222aa    MW: 25444.3 Da    PI: 6.1442
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19271genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63e-1895146155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++ykGVr+++ +g+++AeIrdp     k +r +lg++ t+e+Aa a+++ + kl+g
  OIT19271  95 KKYKGVRRKP-WGKYAAEIRDP---ErKGARLWLGTYETPEDAALAYDRTAFKLRG 146
               59*****888.**********7...3235*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MQGISLEFDQ QNFLDPMQHD LFNDPDFSQI FSELNSFNNT IQTPRNPSSE NTIFAQNMVQ  60
HNQEKYADDH IVPLQETSSE NNKELSSDQV PLEKKKYKGV RRKPWGKYAA EIRDPERKGA  120
RLWLGTYETP EDAALAYDRT AFKLRGSRAV LNFPHLIESN VTEINRVRPR RRSRSPDIEL  180
SSDQNDGPIS KRRNVDLINS LATANLDSQS IVERCLASSC FA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-36ERF family protein