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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT19663 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 257aa MW: 29823.6 Da PI: 5.7355 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 73.3 | 6.1e-23 | 12 | 139 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99
+G+rFhPt+ el+ ++Lk+ ++g++l+ e ++ +diy Pw + ++ ++ e+k yfF++ +k++++ +r +r+ ++g+Wk + ++++ kg++
OIT19663 12 MGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQIADIYGDqPPWAIFgANSDHpEKKVRYFFTRLKKQKSEHTRVRRTCANGTWKGQTGIFPIKNGKGTV 111
7************.9**********88755558888**9873679996334334244455**************************88888*****9**** PP
NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
vg ++++ f ++++++ ++ W+m+ey
OIT19663 112 VGFRRSFKFQSNTKERENNKIWLMKEYF 139
***********9999999*********6 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 257 aa Download sequence |
MSTVPAARCR IMGVRFHPTE AELINFLKRF LKGEPLPSEC PNFQIADIYG DQPPWAIFGA 60 NSDHPEKKVR YFFTRLKKQK SEHTRVRRTC ANGTWKGQTG IFPIKNGKGT VVGFRRSFKF 120 QSNTKERENN KIWLMKEYFV GDDFFRENNI PKEDIVVCRI KKNTRSEKNH GVNMEEQDVA 180 NVMEAMLYGP DEDYCTTVQP TTICEVAEYQ VMDETQKMNE HNNSSNYIND CSNYQEEINW 240 ADDVLVDIDD FGDIICS |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 67 | 77 | KKVRYFFTRLK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G04410.1 | 1e-16 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT19663 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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