PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19692
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 249aa    MW: 28906.7 Da    PI: 7.4756
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19692genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.36.2e-23131413128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
               +G+rFhPt+ el+ ++Lk+ ++g++l+ e   ++ +diy    Pw++  ++ ++ e+k  y F++ +k++++ +r +++ ++g+Wk +    ++++ k+++
  OIT19692  13 MGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQLADIYGDqPPWEIFgANSDHpEHKVRYIFTRLKKQKSEHTRVRQTCANGTWKGQTGIDPIKNGKRTV 112
               7************.9**********88755559999***87368***7333333244456******************99******888889****99999 PP

       NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
               vg ++ + f++ +++  ++ +W+m+ey++
  OIT19692 113 VGFRRCFKFHTRSKEGEHNKNWLMKEYSV 141
               **********8888888899*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MLTVPAARHG CIMGVRFHPT EAELINFLKR FLKGEPLPSE CPNFQLADIY GDQPPWEIFG  60
ANSDHPEHKV RYIFTRLKKQ KSEHTRVRQT CANGTWKGQT GIDPIKNGKR TVVGFRRCFK  120
FHTRSKEGEH NKNWLMKEYS VGDDFFRENN IRKEDIDVCR IKKNIRSKKK HGVNMEEQDV  180
PKVIEAMLDE TDEDYCTTVQ PATICQAADQ HQVMDETQKM NEYNNYSNIN DCSNYQQEAS  240
IGLMICSLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.15e-16NAC family protein