PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19840
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 107aa    MW: 12932.8 Da    PI: 5.0969
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19840genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.63.9e-12686390
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               vl++ ++ +++ + +pk f e+      es   t+ + +g+ W +++  + +++r ++++GWk Fv  n++k g  + F+l++ +ef
  OIT19840  6 EVLMKDSYISQDYMHIPKYFYEHLP----ESHSTTVLHYDGEPWFMEI--NMGKQR-WFKDGWKYFVMNNNIKRGWLINFELVEITEF 86
              67899999999**********5554....23357888999********..888777.79**********************9865555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MNPSFEVLMK DSYISQDYMH IPKYFYEHLP ESHSTTVLHY DGEPWFMEIN MGKQRWFKDG  60
WKYFVMNNNI KRGWLINFEL VEITEFCVIF QLQVTGRGTL QDPVEIN