PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19991
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 186aa    MW: 21269.7 Da    PI: 10.185
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19991genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-0894134954
               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                r RR++i +++  L++l+P       +K++ a++L +Av+Y+k L
  OIT19991  94 ARHRREKISERIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 134
               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MTQLLPNHNS NYMMTTSAHS LSFMPNSIDE HNAPHLLSMH DETLDIEKRS SMDAMREMIF  60
RMAMMQPIHI DPESVKPPKR KNVKISKDPQ SVAARHRREK ISERIRILQR LVPGGTKMDT  120
ASMLDEAVHY VKFLKKQLKS LEQAAVNRPM ITGFSTTLMA QPVDYLSSFR SCQTSHLMSS  180
NVQMLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-49bHLH family protein