PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20007
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 94aa    MW: 10823.9 Da    PI: 9.6356
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20007genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.41.9e-1114801790
              E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
               +pk+f+   g+ ++ s++ +l+  + ++W v+l  + +     l +GWk+Fv +n+Lk g +++F+l++ +++
  OIT20007 14 FIPKRFC---GYLPPISVKTMLRC-NWKEWAVTL--KSGVL-RRLVNGWKQFVVDNNLKKGNVLLFELVEATSG 80
              69****9...56677887777776.669******..33332.45889********************9987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MNPEPYLYIM FLQFIPKRFC GYLPPISVKT MLRCNWKEWA VTLKSGVLRR LVNGWKQFVV  60
DNNLKKGNVL LFELVEATSG VVIFSVEELG LTNA