PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20125
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 106aa    MW: 12925.9 Da    PI: 7.6641
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20125genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.14.8e-11487292
              EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
        B3  2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
              f vl++ ++ k++ + +pk f +++ ++       ++   +g+ W +k+  + +++r ++++ Wk Fv  n++k g  + F+l++ +ef  
  OIT20125  4 FEVLMNDSYIKQDYMHIPKYFYDHIPES----HSTSVLRYDGEPWFMKI--NMGKRR-WFKDVWKYFVMNNNIKRGWLIKFELVEITEFCV 87
              56899*****************766433....35778889*********..777666.79**********************987677744 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
NPSFEVLMND SYIKQDYMHI PKYFYDHIPE SHSTSVLRYD GEPWFMKINM GKRRWFKDVW  60
KYFVMNNNIK RGWLIKFELV EITEFCVVFQ LHVKGRGTLE DPVEIN