PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT20164

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 173aa MW: 20269 Da PI: 9.3859

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT20164	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.1	4.7e-29	13	66	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrW+p+LHe F++ ve+LGG +kAtPk+il+ m++kgL ++hvkSHLQ+YR OIT20164 13 PRLRWSPQLHELFIQSVESLGGRNKATPKRILQKMDIKGLEISHVKSHLQMYRN 66 9****************************************************5 PP
2	Myb_DNA-binding	47.7	3.7e-15	14	65	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW+++++el+++ v+ lGg+ t+k+I ++m kg+ ++ks++q+y+ OIT20164 14 RLRWSPQLHELFIQSVESLGGRnkaTPKRILQKMDiKGLEISHVKSHLQMYR 65 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MRDIRQYKKS LAPRLRWSPQ LHELFIQSVE SLGGRNKATP KRILQKMDIK GLEISHVKSH 60 LQMYRNMKEQ PSLHVVMPYF NLSSTLLVSK RLSSKQKECG SQFCCKERNS SDQNGENIHY 120 NDYQEAEGSI SSGMTKEEEE YCKKERNFWP VDNHKKFHST MENTQINLDL SLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	6e-25	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT20164