PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20179
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 192aa    MW: 21577.2 Da    PI: 9.8318
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20179genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.2e-18115165255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIrdp+      r++lg++ t  +Aaka++ a+ k++g
  OIT20179 115 HYRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYETDVDAAKAYDCAAFKMRG 165
               8********.**********8542..4**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MTRTEDEELT LELISQHLLG ESFVNSLSLD HDICFSTLPD GFQPVILTSD QKPNHFNFDL  60
IFETKPNITR SPTSVTTSVV SNTRIFDDSS LNRTDKKVDG SGYGSSVVEN GKKKHYRGVR  120
RRPWGKYAAE IRDPTRKGSR VWLGTYETDV DAAKAYDCAA FKMRGRKAIL NFPFDAGNLS  180
TPANIGRKRR KG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186192GRKRRKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-43ERF family protein