PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20286
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 309aa    MW: 35911.6 Da    PI: 4.4093
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20286genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.54.1e-134211754128
       NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
               +++  yf ++++k+++t kr +r++ +g+Wk + k ++v++ kg+l+g  k+L +  ++++++ ++ +W+m ey+l
  OIT20286  42 NNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQNKGRDVFDYKGRLMGYVKSLKYIpTNKSSNNVNGEWLMTEYSL 117
               45577***************************************************767888999*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAVYSDCQAK GRPMGNRFYP TEREVLEYLL GFIFEAYDHG NNNNTRYFIT PQKKEKPTWK  60
RVSRTVGKGT WKPQNKGRDV FDYKGRLMGY VKSLKYIPTN KSSNNVNGEW LMTEYSLYDH  120
YLNAREIKNN GFVICKIKKK EKPGDKKNGN NNIDEVVNDR DNMRDIEEFI NSMLQEDVQV  180
KDNGITSNGI AKDDQENNII QYVEGDQVRD HVLGLLDSPE DIVKVNDHEE YVEDCVDQED  240
EVQVHLLEEY IDSVMQSEDV QAEDNGIMSS NDDIAKDDQE NMEYQVKDHQ HATLWTSADD  300
VDLDTINFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.12e-10NAC family protein