PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT20464

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 325aa MW: 35882.9 Da PI: 6.6634

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT20464	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.7	7e-40	56	116	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++++kcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s OIT20464 56 HDHSIKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 116 57889*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MGITSLQVCM DSSDWLQGTI HEEGVAGIDS SSSPISEDIL TCSRPLIVER RLRPPHDHSI 60 KCPRCDSTHT KFCYYNNYSL SQPRYFCKTC RRYWTKGGTL RNIPVGGGCR KNKKVSSKKS 120 NIETANNQNS TDLQLSFPDQ MPAFSHHHFM SSNNFGLGNH QGNNFMLENP TAIDFMESKY 180 EALVGCTSSR NQDFLGNGDI GMIGTPSGFG HDINSHGNII APNFAFGMTT MDAGNNFGTT 240 EMDSSHHHQR LMLSNYENNQ HEEQIINAVD MKPNPKILSL EWHDQVQGCS DAGKESFSYY 300 SSVGGLGSWT GLMNGCGSSA TNPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-48	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT20464