PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20468
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 228aa    MW: 25690.7 Da    PI: 6.7888
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20468genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.61.3e-3252107460
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                   rY+eClkNhA+ +Gg+avDGCgEf+p+ geeg+ +alkCaAC+CHRnFHR+eve e
     OIT20468  52 PRYRECLKNHAVGIGGQAVDGCGEFLPA-GEEGSLDALKCAACNCHRNFHRKEVEGE 107
                  69*************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEFDEEHEDQ EEEIANISQI PATTENNYQE FGEGGPISQA AATIRKNIVP SPRYRECLKN  60
HAVGIGGQAV DGCGEFLPAG EEGSLDALKC AACNCHRNFH RKEVEGEILN FHHPTPPPIL  120
HHPPHHYPYR YLQRPLALPS ISSREDIEDY VSNPSSSGGG GSGSRKRFRT KFTQDQKEKM  180
FAFAEGLGWR IQKENEAAVQ QFCAETNIRR QVFKVWMHNN KHALGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-62ZF-HD family protein