PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20588
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 258aa    MW: 29595.5 Da    PI: 6.5122
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20588genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.26.6e-19131403128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
               +G+rF  t+ el+ ++Lk+ ++g+ l+ e   ++ +diy    Pw++ ++ ++ eek  y F++ +k++++ +r +r+ ++g+Wk +    ++++ kg++v
  OIT20588  13 MGVRFPRTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWQIFAASDHpEEKVRYIFTRLKKQKSEHTRVRRTCANGTWKGQTGIFPIKNGKGTVV 112
               7************.9*********977755459999***87368***744333255566**************************88888*****9***** PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               g ++ + f + +++  ++ dW+m+ey++
  OIT20588 113 GFRRCFKFQTSSKEGEHNKDWLMKEYSV 140
               *********998888899********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MSMVPAARRG CIMGVRFPRT EAELINFLKR FLKGELLPSE CPNFQLADIY GDQPPWQIFA  60
ASDHPEEKVR YIFTRLKKQK SEHTRVRRTC ANGTWKGQTG IFPIKNGKGT VVGFRRCFKF  120
QTSSKEGEHN KDWLMKEYSV GDDFFKENNI PKEDIVVCRI KKNIRAEKNH GVTMEEQVAP  180
KVIEAMLHGP DEVYGTTVLQ PETTCEAAEH QVMDETQKMN EQNNNNSSNT NDCSNYQQEI  240
NWADDLLIGI GDFGDIIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-11NAC family protein