PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20741
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 301aa    MW: 34990.3 Da    PI: 6.2981
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20741genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.0009161185123
               EEETTTTEEESSHHHHHHHHHH..T CS
   zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
               + C+ C+k ++  ++++ H+++  H
  OIT20741 161 FFCELCNKQYKLAMEFEAHLSSydH 185
               67*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDDRWFNGRP ELRMRDKRQQ EMEQADEASV LEDLAEDFRL PINHRPTENI DLENVEQASL  60
ETQLPSSNIG FRLLQKMGWK GKGLGKNEQG ITEPIKSGMR DPKLGIGKQE EDDYFTAEEN  120
IQRRKLDIER EETEELAKKR EVLAEREHKI ETEVKEIRKV FFCELCNKQY KLAMEFEAHL  180
SSYDHNHRKR FKEMREMHGS SRDDRQKREQ QRQEREMAKF AQMAANKKQE EQQTPEEAGN  240
IPAPSMVRTA TALADQDQRK TLKFGFSAKG GSSKVTTLVN KAAKKPKVTV ASVFSNESDE  300
E