PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20836
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 230aa    MW: 25789.1 Da    PI: 5.4634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20836genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.4e-1374120554
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               + +rE+ RRd++N++f+eL ++l +    +++K++K+ iL  Av+ + +L
  OIT20836  74 KAQREKMRRDKLNDRFQELSSILEPG---KQPKMDKSVILSDAVRMVVQL 120
               678**********************9...9**************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAETEEDGSN WLIELGLMED LPSLEPNAQW PSTAFSLPNN VSSGLDDSYG NSDSLKDRGS  60
KKRARSGACA SDSKAQREKM RRDKLNDRFQ ELSSILEPGK QPKMDKSVIL SDAVRMVVQL  120
RDEAQKLKES YDNLQEKVNE LKAEKNELRD EKQKLKAEKD KLEQQLKTMN AQPGFLPHPP  180
AMASTFSAPH QVYASKMMPY LGYPGIPMWQ FVPPAAVDTS EDHALRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-84bHLH family protein