PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20893
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 183aa    MW: 20750.7 Da    PI: 8.1288
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20893genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.86.2e-073395591
      FAR1 55 raetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
              + ++r++C+a+++ k  +++ w+v+ +++ H+Hel+p
  OIT20893  3 KYSKRVNCEARVNCKALSENLWCVILVNNLHSHELFP 39
              6789*******************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
NSKYSKRVNC EARVNCKALS ENLWCVILVN NLHSHELFPD LSYVMAAHRH VPLSLQRPLE  60
ANNRASAKIC TNFRTIEVLS GVPQEMRCTA NDCTNFIITS MKGLTKDGDT KLTLIFFLSS  120
SKQENDGFFH SIELDAQGRL KNVIWIHPQD KAGYGDFTDV ISFYTTYLVS GYNMLYVAFV  180
RVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.25e-17FAR1 family protein