PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20984
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 100aa    MW: 11722.4 Da    PI: 7.6577
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20984genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.22.2e-11374886
              -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
               ++ + + l++p+k   +h  +   +++  l + +g++W v++  + +++r  +++GWk Fv +n++k g +v F+l++
  OIT20984  3 DSYINYDDLYIPRKIY-KHLPP---TVETALLNYRGQEWYVNM--SVGDRR-RFKTGWKFFVLDNHVKRGFIVKFTLVD 74
              45666778*******9.66323...35799*************..555544.3899********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MTDSYINYDD LYIPRKIYKH LPPTVETALL NYRGQEWYVN MSVGDRRRFK TGWKFFVLDN  60
HVKRGFIVKF TLVDVAPLYV DFNVELKGEG TSDNNPVGID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.15e-07B3 family protein