PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21179
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 219aa    MW: 24982.8 Da    PI: 4.7559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21179genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-1888138255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr ++ +g+++AeIrd + ng   r+++g+f++ae Aa a+++a+ +++g
  OIT21179  88 NYRGVRKRP-WGKFAAEIRDSTRNG--VRVWIGTFDSAEAAALAYDQAAFAMRG 138
               59*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MDSSFMHYQN PYDQNYSPES SSWDELLFHQ NSLPFNVNDT EDMFLCNLVA EGDRIVVKES  60
STETINSSSS SGTKEEEVTS CEPEKEKNYR GVRKRPWGKF AAEIRDSTRN GVRVWIGTFD  120
SAEAAALAYD QAAFAMRGSL AILNFPVEIV KESLSEMKCR FDEGCSPVIE LKKKHSMRKK  180
TQSRRNRVRK DESNVVVFED LGAEYLEELL SSSECVTNW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184190RRNRVRK
2184191RRNRVRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-49ERF family protein