PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21230
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 246aa    MW: 26977 Da    PI: 5.0205
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21230genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1866115255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  OIT21230  66 VYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALSIKG 115
               59****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MAEVEVPCPE TESSTTNSSS SSSSLSSESM HYSVFNSSKE LPEDKKPPTK RKRETINTGN  60
RVQNQVYRGV RMRSWGKWVS EIREPRKKSR IWLGTYPTAE MAARAHDVAA LSIKGKSAIL  120
NFPNLIDSLP RPVSNLPRDV QAAAAKAAAM NLNLTSVSSS SSFSSSTTIT STGSEELGEI  180
IELPSLEESD ETKTELRLSD SVEGWLYSPW WASTDSDFCG YFLEQSASAT GESSIPSSFE  240
ILKWAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-49ERF family protein