PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21302
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 331aa    MW: 38124.9 Da    PI: 6.668
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21302genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.25.3e-1383161291
      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               fY+e+A+  GFsv k++s+k+   ++    t++C +   r+ + ++          +  +Cka++   ++++g w+v+k++++HnHel p
  OIT21302  83 FYKEHARLRGFSVIKRNSNKK-GGDTARYITYCCDRTRIRKIKFTT----------KSNNCKARVFTVLDDSGCWRVSKVVHDHNHELLP 161
               9***************99998.55558899******9999987666..........7789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MNTNRSMLIL TAVSTMLHLD DDDEEADGEY HGEANDDEEQ VLGNELELCD VDGEMENEFT  60
EEDFVVGPTS GMRFRDKDTL FAFYKEHARL RGFSVIKRNS NKKGGDTARY ITYCCDRTRI  120
RKIKFTTKSN NCKARVFTVL DDSGCWRVSK VVHDHNHELL PSVSRLMAGH MSVSDSLKRD  180
LVAHDRSGIR PSKNIRLAEV QRGGPQNLGC TPKDCRNYIL KSRNFEMKEG DAQSLLNFFR  240
EIQVKDREFF YSIDVDNIGR LRNVVWVHSH CKAAYEHFHD AICFDTTYLV NRYNMPCASF  300
VGINHHRQSI LLGCALMSHE DIDSYKLVFR T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-42FAR1 family protein