PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21386
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 107aa    MW: 12628.8 Da    PI: 9.9101
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21386genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.72.1e-131798390
              EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
        B3  3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
                 +p ++ k++ ++l+kk + ++  ++    +  t+   +g++W+v+l+   ++    l +GWk+Fv +n+Lk g +++F+l++  s++
  OIT21386 17 RMKLPRSYIKRDYMYLSKKIC-QYlPIS----TAKTILRCNGKEWNVTLTSIVRR---RLVNGWKQFVVDNKLKKGSVLLFELVEAtSSA 98
              4556889999999********.663444....34466688*********543332...3889********************99764554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MNADGWIEEE EFYLWFRMKL PRSYIKRDYM YLSKKICQYL PISTAKTILR CNGKEWNVTL  60
TSIVRRRLVN GWKQFVVDNK LKKGSVLLFE LVEATSSAVI FVVEVQG