PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21388
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 94aa    MW: 10541.4 Da    PI: 9.7403
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21388genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32e-1115811891
              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
        B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
              +pk+ +   g+ ++ s++ +l+  + ++W v+l  + +++r  l +GWk+F  +n+Lk g +++F+l++ +++ 
  OIT21388 15 IPKSIC---GNLPPISVKTMLR-CNKKEWAVTL--TSGGRR-RLVNGWKQFIVDNNLKKGNVLLFELVEATSGA 81
              677777...3445566666655.488*******..444444.5889********************99876554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MNPEPYLYIV FLQFIPKSIC GNLPPISVKT MLRCNKKEWA VTLTSGGRRR LVNGWKQFIV  60
DNNLKKGNVL LFELVEATSG AVIFSVEELG LTNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-07B3 family protein