PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21442
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ARR-B
Protein Properties Length: 600aa    MW: 67018.4 Da    PI: 6.6491
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21442genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.23.4e-27355409156
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
               k +++W+peLH++Fv+aveqL G+++A+P++ilelmkv+g+t+++v+SHLQkYR++
  OIT21442 355 KMKVDWSPELHKKFVQAVEQL-GIDQAIPSRILELMKVEGITRHNVASHLQKYRMH 409
               5689*****************.********************************96 PP
2Myb_DNA-binding39.41.4e-12358407248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        W++e+++++v+av+qlG +   +++I + m  +g t+ ++ s++qky+
         OIT21442 358 VDWSPELHKKFVQAVEQLGIDqaIPSRILELMKvEGITRHNVASHLQKYR 407
                      57***********************************************7 PP
3Response_reg31.31e-11591651109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+ d++ + +  +r+ lek +y +v ++ +  eal  + +k   +++ ++ +   ++dG+  l+ +++++ +lp i+ +   + +++ +++ +Ga 
      OIT21442  59 VLLLDEDYNSAAEMRSRLEKLDY-IVYSFCNENEALSAISNKSecFHVAIVEVTTGNSDGV--LQFLESAK-DLPTIMTSNIHSLSTMMKCIALGAV 151
                   79999999***************.***************999999***************5..66676666.9*******9999************* PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   +fl Kp + ++l +
      OIT21442 152 EFLQKPLSDDKLKN 165
                   **********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MHLWSAAAEN NKTHKTQPTP IILEALIWLT EKDAILEMIC TEINDQLLGW KDFPKGLKVL  60
LLDEDYNSAA EMRSRLEKLD YIVYSFCNEN EALSAISNKS ECFHVAIVEV TTGNSDGVLQ  120
FLESAKDLPT IMTSNIHSLS TMMKCIALGA VEFLQKPLSD DKLKNIWQHV VRKAFNAGEK  180
DVPESLKPVK ESLVSVPQLQ RVKSAPDDKS SNETEPFTSV PDNNNEQSSG CDKYPAPSTP  240
QLKQGVRSVD DGDCQDHTIF STEQDSGEHD GDTKSVETTF NNTVAESTVQ TSPPEQRQTI  300
VKEENGSSPH QKMEADIAIS SPSNNCPDNS SSHSAEPSKA SAPHSSSGTK TNKKKMKVDW  360
SPELHKKFVQ AVEQLGIDQA IPSRILELMK VEGITRHNVA SHLQKYRMHR RQILPKEVER  420
RWPNPQPRDS VQRSYYPHHR PIMTVPPYHS NHVPAVGQLH PAWVPPASYP NGLQVWGSPY  480
YPAWQPADSW HWKPHPGLHA DAWGSPVMPP SFGSYPAYPQ NGGVYRPNGM QNRYSMLEKS  540
FDLHPAEEVI DKVVKEAITK PWLPLPLGLK PPSTESVLHE LSRQGISTVP TQINGSRCRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-133ARR-B family protein