PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21495
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 226aa    MW: 25212.8 Da    PI: 8.1472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21495genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-181666155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  OIT21495 16 TVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALAIKG 66
              57*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEVKKIKRIR ESNKHTVYRG VRMRNWGKWV SEIREPRKKS RIWLGTFPTP EMAARAHDVA  60
ALAIKGNDAT LNFPELANSL PRPKSLTPRD IQAAATKAAS MQNSDSSCKI DTCIRVGCLH  120
HTSCDAAFPR TIRECKILRA PSCSLSSTLS TSSSLLPTNS AMTDLGTTSD ELTQIIELPR  180
LETIFDDLFD LKNDFLCADY PSPWLSCDGE LGTISSCFEP SLLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-55ERF family protein