PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21647
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 164aa    MW: 18554.4 Da    PI: 10.2927
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21647genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.5e-0991131954
               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                r RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  OIT21647  91 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 131
               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MTSPPSNFSF MGNPIEEPNI PILSSIDEII ASAHSNGNEY SCLQNRNSME AMREMIFRMA  60
MMQPIHIDPQ SVKPPKRKNV KISKDPQSVA ARHRRERISE RIRILQRLVP GGTKMDTASM  120
LDEAVHYVKF LKKQLQSLEQ TAVNNRPMVA GFSTTLSPAP MNYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-44bHLH family protein