PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT21684

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB

Protein Properties

Length: 290aa MW: 31953.1 Da PI: 8.6645

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT21684	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G g+W++ + g+ R++k+c++rw +yl OIT21684 14 KGAWTKEEDQRLINYIRSHGEGCWRSLPTAAGLQRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	59.7	6.2e-19	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEdel+++++ +lG++ W+ Ia +++ gRt++++k++w+++l OIT21684 67 RGNFTEEEDELIIKLHSLLGNK-WSVIAGRLP-GRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDQRLINYIR SHGEGCWRSL PTAAGLQRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS VIAGRLPGRT DNEIKNYWNT HLKRKLISRG 120 IDPQSHRPLN AAATSTPASA VTTTIPTTTP KNICTDFTNS VDQKPNIINQ SNNTTDSSYD 180 ETKCNSGTTT EETKPLEISQ KTSQQLMINL ELSIGLPLHT KTTDHISSAE STASYNFLAA 240 LSPPPTAAVP VTAAAEMVAK TVCLCWQIGF QGGGQSCGKC KTATGFYRYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-91	MYB family protein

Link Out ? help Back to Top
Ensembl	OIT21684