PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21721
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 255aa    MW: 28999.8 Da    PI: 9.8278
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21721genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003397119223
               EETTTTEEESSHHHHHHHHHH.T CS
   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
               +C+ C+++++++ +L  H +  H
  OIT21721  97 SCSVCSRVYPTSRLLSIHVSEaH 119
               6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MAMEVETQTQ SQLGFPFWSP IRRRFRPDDP FFTAGNIQRE LFAKQLALDL TEEEKQLVQN  60
ITDEESSNVF CPIVGCGARM RSLDDFEHHY ATRHTASCSV CSRVYPTSRL LSIHVSEAHD  120
SFFQAKVARG FPMYECLVEG CDVKLKSYKS RQQHLVDKHK FPATYEFFRK ARPSKKQRQK  180
IHHKQASRKT RETSSAMQVE DETMDNLVSA VSKLTTSDSP SAISFGRSRA RGLSFVPRAV  240
NRQIGPVTST GGTQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-102C2H2 family protein