PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21812
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 346aa    MW: 37624.1 Da    PI: 6.4397
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21812genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.7e-17235269135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  OIT21812 235 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 269
               99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEASDFFVSG YFSNAGDEQS PNNNNNNNNF TVDDLLDFSK EDEVMTDAFF DSITGNSADS  60
STVTVVDSCN SSVSGENGHF NGNLSCRSFT DAPFPTSELC VPYDDLAELE WLSNFVEESF  120
SSDDVQNLQL IPVTNINSAA NNTTDSSSSA STISAGTNSP PAFPADTSVP GKARSKRSRA  180
APCDWSSRLQ LLLSPTTSSS ESNNSAANNN TSATVKATKA PSKKRESIET PGRKCLHCAS  240
EKTPQWRTGP MGPKTLCNAC GVRYKSGRLV PEYRPAASPT FVSAKHSNSH RKVLELRRQK  300
EFQRHPAHHH QHQLISQTSI FGVSNGGDDF LLHHHQNCGP NFRHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-73GATA family protein