PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21945
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 266aa    MW: 29226.2 Da    PI: 8.2035
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21945genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.72.9e-393393262
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
              ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn++s+
  OIT21945 33 KEQAINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNRRSN 93
              7899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDTSHWPQGI GLVKAVEPSK PVPATERKPR PQKEQAINCP RCNSTNTKFC YYNNYSLSQP  60
RYFCKTCRRY WTEGGSLRNV PVGGGSRKNR RSNSSSNNSS SSTSSSYKKI PDLTIPTSSS  120
QNPKIINEPH DLNLSFNPTT TSNFSNISEL MALPLMNPNS TTSFMSSIMP QLSDSNNIVY  180
SSTSTGLPNL HDLKPTLNFS LDGFDNNNGY GSLQGETAGA KLFFPLDDLK NVSTANDDHD  240
FDEQNRGQAA ESHGFWNGML GGGSSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.15e-45Dof family protein