PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT22421

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 321aa MW: 36803.8 Da PI: 8.3379

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT22421	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.5	1.8e-55	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 lppGfrFhPtdeel+++yL +kv ++++ + +i evd++k+ePwdLp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkd+e+++ +++lvg OIT22421 17 LPPGFRFHPTDEELITHYLSNKVVDSNFFA-IAIGEVDLNKIEPWDLPWKAKMGEKEWYFFCVRDKKYPTGLRTNRATAAGYWKATGKDREIFR-GKSLVG 115 79***********************877.78***********888999************************************.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrle 129 +kktLvfykgrapkgekt+Wv+heyrle OIT22421 116 MKKTLVFYKGRAPKGEKTNWVIHEYRLE 143 **************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MENYSGLVKE DDQQMELPPG FRFHPTDEEL ITHYLSNKVV DSNFFAIAIG EVDLNKIEPW 60 DLPWKAKMGE KEWYFFCVRD KKYPTGLRTN RATAAGYWKA TGKDREIFRG KSLVGMKKTL 120 VFYKGRAPKG EKTNWVIHEY RLEGRLSLQN LPKTAKNEWV ICRVFQKSCG GKKIHISGLV 180 KLNSDENEMA NSNFLPPLTD SSPYIGKIKP AASQSSHVHC FSNFFTAQKS QENMINYFNN 240 SPNFSALSNP MNDIPISTFS CNQIFPVQNY TQNFKKEEIV SLSQETKLST DMNNEISSIV 300 SNLELGKRLL EDQSLDCLWS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-128	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT22421