PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22459
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 192aa    MW: 21830.4 Da    PI: 5.4661
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22459genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.4e-1956107256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
               +y GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ +++g+
  OIT22459  56 KYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTAEEAAMAYDQAAFSMRGA 107
               89*******.**********44465..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MEHLKNQYQT QTSNVYIVAE EVKVKVEAES SIETNSSKER ETNDEEVNFN PKNPQKYIGV  60
RKRPWGKYAA EIRDSTRNGI RVWLGTFDTA EEAAMAYDQA AFSMRGAQTC LNFPVEKVRE  120
SLQKMECNNL KDGLLSPAAA LKEKHKKRNS SSSRKKQVNI IKEEENVFIF EDLGPDLLDE  180
LLSSENSSCS NC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144156KHKKRNSSSSRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.12e-30ERF family protein