PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22460
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 169aa    MW: 19304.9 Da    PI: 5.8027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22460genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.1e-193586256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y GVr ++ +g+++AeIrd + ng  +r++lg+f+taeeAa  +++a+ +++g+
  OIT22460 35 HYIGVRKRP-WGKFAAEIRDSTRNG--RRVWLGTFDTAEEAAMTYDQAAFCMRGP 86
              799******.**********44465..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MDLKIQDHEK LISIKVEVES LSLEIDDSIS KEEKHYIGVR KRPWGKFAAE IRDSTRNGRR  60
VWLGTFDTAE EAAMTYDQAA FCMRGPSTCM NFPVEKVRES LQKMECNNLK DGLLSPAAAL  120
KEKHKKRSSS SSRKKQVNII KEEENVFIFE DLGPDLLDEL LSEYSSCSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123135KHKKRSSSSSRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.12e-40ERF family protein