PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22647
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 130aa    MW: 14853.5 Da    PI: 5.334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22647genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.6e-201567256
       AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr ++ +g+++AeIrd  +++    r++lg+f taeeAa+a+++a+ +++g+
  OIT22647 15 KYRGVRKRP-WGKFAAEIRDtSRQG--GVRVWLGTFTTAEEAARAYDKAAYSMRGN 67
              8********.**********44334..4*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MDERGKIKDT TEEVKYRGVR KRPWGKFAAE IRDTSRQGGV RVWLGTFTTA EEAARAYDKA  60
AYSMRGNLAI LNFPEEYNLP SSSSHFNTGS SSMVSSSVQE RNEQVLELEY LDDKLLEELL  120
DCDEHANKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.12e-23ERF family protein