PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT22693

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

DBB

Protein Properties

Length: 191aa MW: 21338.8 Da PI: 6.3306

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT22693	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.3	6.3e-08	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++++e++++C ++ lC+ C + H+ OIT22693 4 QCEICDKEEASIYCSADEATLCQRCDYQVHHA 35 7***************************9743 PP
2	zf-B_box	30	1.1e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++C+ ++e ++ lfC++++ lC++C l++Hk Ht OIT22693 55 SPRCDICQERRALLFCKEDRAILCKECDLHIHKAneHT 92 689*****************************888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MKIQCEICDK EEASIYCSAD EATLCQRCDY QVHHANKLAS KHLRFSLIHP SFKDSPRCDI 60 CQERRALLFC KEDRAILCKE CDLHIHKANE HTKKHNRFLL TGVQLSSAVA SYNQTSSSSS 120 PTGSAASNAE NYISCTSSSG ILKGNSTVES TPNFQEGSVS TSSISEYLIE TLPGWHVEDF 180 LEYPCSSHYE F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	9e-65	DBB family protein

Link Out ? help Back to Top
Ensembl	OIT22693