PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT22706

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB

Protein Properties

Length: 174aa MW: 20270.8 Da PI: 6.6387

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT22706	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.8	9.2e-12	2	46	2	44
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT eEd+l+ +a +++ + +W +Ia +++ g+t ++++ ++ OIT22706 2 SKWTREEDKLFEHALVLYPENiadRWQLIADHVP-GKTIEDIIAHY 46 58******************************.********9 PP
2	Myb_DNA-binding	47.1	5.6e-15	87	131	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky OIT22706 87 PWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKY 131 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MSKWTREEDK LFEHALVLYP ENIADRWQLI ADHVPGKTIE DIIAHYDDLV HDLLEIDSGR 60 IELPTYTDDP VESNKKNIEI ERKKGTPWTE EEHRLFLIGL EKYGKGDWRS ISRNVVVTRT 120 PTQVASHAQK YFIRQQAMKK ERKRSSIHDI TTAGDTNPVP PQSSFQNQRG NFTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	4e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	OIT22706