PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22821
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 341aa    MW: 38696.1 Da    PI: 7.6754
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22821genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.71.1e-5381371129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
               +ppGfrFhPtdeel+++yLkkk++ +k+++ evi+evd++k+ePwdL++k+k     ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + + +
  OIT22821   8 VPPGFRFHPTDEELLHYYLKKKISFQKFDM-EVIREVDLNKIEPWDLQEKCKIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN-SFK 106
               69****************************.99**************964444222455*************************************9.889 PP

       NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
               ++g++ktLvfy+grap+g+ktdW+mheyrle
  OIT22821 107 KIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137
               9****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MATSSGGVPP GFRFHPTDEE LLHYYLKKKI SFQKFDMEVI REVDLNKIEP WDLQEKCKIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSFKKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDVD DPQGNQSDDG WVICRVFKKK HLFKVGNEGG GVTSSDQLNS  180
TSSHQSRAFN SQYLLQQQQQ GGHGLNCSHI PLALPQYNSH LQLQPQNFIP NKPLGYHDFS  240
ALPTSDHQAP LMVKQLMSSA DSGCSDQNLP YQQEVGSSCD HQNLNEWGMI ASSHGQLGHG  300
QEDDDSAKNA GVRFDDANAS SMSQINQLSL RGEMDFWGYT K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.11e-130NAC family protein