PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22871
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GRAS
Protein Properties Length: 441aa    MW: 50619.6 Da    PI: 6.1136
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22871genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS325.97.7e-100574303374
      GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
               +lL ecA+a+s++d +++++lL+ l+elasp+gd +q+la+yf++AL  + ++++ ++yk+l++ ++++k+ +++ +    f+evsP+ +f+h++ N aIl
  OIT22871  57 RLLRECATAISEKDSTKIHHLLWMLNELASPYGDCNQKLAFYFLQALFCKATDTGLRCYKTLTSAAEKSKSFDSSRKLILKFQEVSPWTTFGHVASNGAIL 157
               7899**********************************************************9999987666666566666******************** PP

      GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpgEala 203
               ea++ge+r+HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+ +++  k  ++e+++r++kfA+ +gvpfefnv+  +++l++l+ e+L++k++Ea+a
  OIT22871 158 EALDGESRLHIIDISHTFCTQWPTLLEALATRNDETPHLKLTVVVTESTLVKSVMKEVAQRMEKFARLMGVPFEFNVIsGSNHLKKLTKESLNIKEEEAVA 258
               **********************************************9999***************************95556******************* PP

      GRAS 204 VnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
               Vn++ +l ++      +e+ r +v+++++sl+Pk+v++ve+ead   ++++F++ f e+l++y+  f++l++++p +s+er ++Ere  +++iv+v+ac  
  OIT22871 259 VNCIGALRKVE-----VEE-RGDVIRMLQSLNPKIVTIVEHEADFssTRNDFVKCFEECLRFYTLYFEMLDESFPITSNERLVIERE-CSKSIVKVLACDD 352
               ********997.....444.889*******************999545669************************************.89*********85 PP

      GRAS 303 ae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.....eesgslvlgWkdrpLvsvSaWr 374
               +      e +e+ ++W+erl+e  F+p pl+++a++++k+ll+++k ++  ++      +es  ++l+W+d+p+v++SaW+
  OIT22871 353 QIgegDGETRERGNQWSERLREW-FSPFPLNDDAVDDVKSLLKRYKvGW--SLVlpqenQESPGIYLTWRDEPVVWASAWK 430
               532226799999********997.**********************544..444445555688899**************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MEKSLFFSKP TNNFLVTNYV HHLINMQNPN QQPHEKLSRS QSPENGDPVS DAKWASRLLR  60
ECATAISEKD STKIHHLLWM LNELASPYGD CNQKLAFYFL QALFCKATDT GLRCYKTLTS  120
AAEKSKSFDS SRKLILKFQE VSPWTTFGHV ASNGAILEAL DGESRLHIID ISHTFCTQWP  180
TLLEALATRN DETPHLKLTV VVTESTLVKS VMKEVAQRME KFARLMGVPF EFNVISGSNH  240
LKKLTKESLN IKEEEAVAVN CIGALRKVEV EERGDVIRML QSLNPKIVTI VEHEADFSST  300
RNDFVKCFEE CLRFYTLYFE MLDESFPITS NERLVIEREC SKSIVKVLAC DDQIGEGDGE  360
TRERGNQWSE RLREWFSPFP LNDDAVDDVK SLLKRYKVGW SLVLPQENQE SPGIYLTWRD  420
EPVVWASAWK PREKSMERHD Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-142GRAS family protein