PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT23510

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 617aa MW: 68554 Da PI: 6.1438

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT23510	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.9	1.1e-23	203	256	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt+ LH++F+ea++ + G +kA Pk+il+ mkv+gLt+++v+SHLQkYR+ OIT23510 203 KTKVVWTSSLHNKFLEAIRDI-GFDKAAPKKILDQMKVPGLTRANVASHLQKYRI 256 6799***************.******************************6 PP
2	Myb_DNA-binding	30.1	1.1e-09	206	255	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a++ G + +k+I m g+t+ ++ s++qky+ OIT23510 206 VVWTSSLHNKFLEAIRDIGFDkaAPKKILDQMKvPGLTRANVASHLQKYR 255 68***********************************************7 PP
3	Response_reg	71.1	4.4e-24	13	121	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+ + +++++ +l+k +y +v +++++ +al +l+ k +Dl+++D+ mp+m+G+el + i+ e +lp+++++a ++e ++l+ l+ Ga OIT23510 13 ILVVDDDVVCLSIVAMILKKCKY-QVMTVKHPMDALSILRIKGgsFDLVVVDVHMPDMNGFELQQVITDEF-ELPVVLMSADDKEGTILKGLDGGAA 107 89*******************.***********666666******************9999.9******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 fl+Kp++ ++l++ OIT23510 108 FFLVKPISVDDLRD 121 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MEVETLINKS ISILVVDDDV VCLSIVAMIL KKCKYQVMTV KHPMDALSIL RIKGGSFDLV 60 VVDVHMPDMN GFELQQVITD EFELPVVLMS ADDKEGTILK GLDGGAAFFL VKPISVDDLR 120 DLWQYSLLQK KKGKRVLLEE IDCLEKSSTC NKKSLHEVRE SASSINENCY QHIKKEKSKR 180 KPARTQRNAD KDNSGNSAAP FKKTKVVWTS SLHNKFLEAI RDIGFDKAAP KKILDQMKVP 240 GLTRANVASH LQKYRIFLER VSDACCRIQA ADTSLAIKAV QSTSASGMLS QEKFGLQKQF 300 SENTTNPRSL IHTANNGSSS FRTQQTRQTI PSGYEQAQLF LNEGNLGNIT HSNGNPLYKA 360 NQLTSTMKAN NYQTGSSAYE DISSQLMNGS TSTQVHRMLS GNPANRLSDR NLLALGTNGI 420 TEHATLNGNL NFLRDGLADD QCGTNFTQNN YADEASTLFA GPMNFIGKSQ HDSEQCFAQE 480 ASSSVRFDGE KKCSAILSDH IDEETYMQLP SFVNNVCRGQ EVEAMLDQVC NFSEFHNIND 540 TQQSRGIGDL SVSFVNQGNV QPHQRHHRIG HTEPVEDGMS QLHNVFSYPT EQSKDEEFLE 600 LVLASSPYED DQNPDGL

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MEVETLINKS ISILVVDDDV VCLSIVAMIL KKCKYQVMTV KHPMDALSIL RIKGGSFDLV  60
VVDVHMPDMN GFELQQVITD EFELPVVLMS ADDKEGTILK GLDGGAAFFL VKPISVDDLR  120
DLWQYSLLQK KKGKRVLLEE IDCLEKSSTC NKKSLHEVRE SASSINENCY QHIKKEKSKR  180
KPARTQRNAD KDNSGNSAAP FKKTKVVWTS SLHNKFLEAI RDIGFDKAAP KKILDQMKVP  240
GLTRANVASH LQKYRIFLER VSDACCRIQA ADTSLAIKAV QSTSASGMLS QEKFGLQKQF  300
SENTTNPRSL IHTANNGSSS FRTQQTRQTI PSGYEQAQLF LNEGNLGNIT HSNGNPLYKA  360
NQLTSTMKAN NYQTGSSAYE DISSQLMNGS TSTQVHRMLS GNPANRLSDR NLLALGTNGI  420
TEHATLNGNL NFLRDGLADD QCGTNFTQNN YADEASTLFA GPMNFIGKSQ HDSEQCFAQE  480
ASSSVRFDGE KKCSAILSDH IDEETYMQLP SFVNNVCRGQ EVEAMLDQVC NFSEFHNIND  540
TQQSRGIGDL SVSFVNQGNV QPHQRHHRIG HTEPVEDGMS QLHNVFSYPT EQSKDEEFLE  600
LVLASSPYED DQNPDGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-50	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIT23510